Researcher
Zeynep Kalender Atak
- Disciplines:Genetics, Systems biology, Medical imaging and therapy, Molecular and cell biology, Other paramedical sciences
Affiliations
- Department of Human Genetics (Department)
Member
From1 Feb 2019 → 30 Sep 2019 - Laboratory of Computational Biology (VIB-KU Leuven) (Division)
Member
From13 Nov 2009 → 28 Feb 2018
Publications
1 - 10 of 16
- Mapping gene regulatory networks from single-cell omics data(2018)
Authors: Mark Fiers, Liesbeth Minnoye, Carmen Bravo González-Blas, Zeynep Kalender Atak, Stein Aerts
Pages: 246 - 254 - Identification of cis-regulatory mutations generating de novo edges in personalized cancer gene regulatory networks(2017)
Authors: Zeynep Kalender Atak, Hana Imrichova, Valerie Christiaens, Stein Aerts
Pages: 80 - Decoding transcriptional states in cancer(2017)
Authors: Jasper Wouters, Zeynep Kalender Atak, Stein Aerts
Pages: 82 - 92 - Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic(2016)
Authors: Annelien Verfaillie, Dmitry Svetlichnyy, Hana Imrichova, Kristofer Davie, Mark Fiers, Zeynep Kalender Atak, Valerie Christiaens, Stein Aerts
Pages: 882 - 895 - Identification of High-Impact cis-Regulatory Mutations Using Transcription Factor Specific Random Forest Models(2015)
Authors: Dmitry Svetlichnyy, Hana Imrichova, Mark Fiers, Zeynep Kalender Atak, Stein Aerts
- i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly(2015)
Authors: Hana Imrichova, Zeynep Kalender Atak, Delphine Potier, Stein Aerts
Pages: W57 - W64 - Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state(2015)
Authors: Annelien Verfaillie, Hana Imrichova, Zeynep Kalender Atak, Michael Dewaele, Valerie Christiaens, Dmitry Svetlichnyy, Flavie Luciani, Laura Van den Mooter, Sofie Claerhout, Mark Fiers, et al.
- iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections(2014)
Authors: Annelien Verfaillie, Hana Imrichova, Bram Van de Sande, Laura Standaert, Marina Naval Sanchez, Delphine Potier, Dmitry Svetlichnyy, Zeynep Kalender Atak, Mark Fiers, Chris Marine, et al.
- Identification of a novel, recurrent MBTD1-CXorf67 fusion in low-grade endometrial stromal sarcoma(2014)
Authors: Barbara Dewaele, Joanna Przybyl, Anna Quattrone, Julio Finalet Ferreiro, Ellen Geerdens, Zeynep Kalender Atak, Agnieszka Wozniak, Philippe Moerman, Raf Sciot, Frédéric Amant, et al.
Pages: 1112 - 1122 - Comprehensive analysis of transcriptome variation uncovers known and novel driver events in T-cell acute lymphoblastic leukemia(2013)
Authors: Zeynep Kalender Atak, Kim De Keersmaecker, Ellen Geerdens, Anne Uyttebroeck, Peter Vandenberghe, Jan Cools, Stein Aerts