Researcher
Peter Dawyndt
- Keywords:bioinformatics, Dodona, software development, EdTech, educational technology, computational biology, programming, Unipept
- Disciplines:Computational transcriptomics and epigenomics, Other computer engineering, information technology and mathematical engineering not elsewhere classified, Bio-informatics, Visual computing not elsewhere classified, Bioinformatics and computational biology not elsewhere classified, Computational evolutionary biology, comparative genomics and population genomics, Other information and computing sciences not elsewhere classified, Computational biomodelling and machine learning
Affiliations
- PC-Lab of the Faculty of Science (Administrative office)
Responsible
From1 Oct 2010 → 30 Sep 2022 - PC-Lab of the Faculty of Science (Administrative office)
Member
From1 Oct 2010 → 30 Sep 2022 - Department of Applied Mathematics, Computer Science and Statistics (Department)
Member
From1 Oct 2006 → Today - Department of Mathematical Modelling, Statistics and Bio-informatics (Department)
Member
From1 Oct 2005 → 30 Sep 2006 - Department of Biochemistry and microbiology (Department)
Member
From1 Oct 1999 → 30 Sep 2005
Infrastructure
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- ELIXIR Belgium (Consortium partner)
Projects
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- Dodona: learn to code with a virtual co-teacherFrom15 Apr 2023 → TodayFunding: IOF - technology concept exploration
- Microbial activation: the key to unlock chitin as an agricultural beneficial?From1 Oct 2021 → 31 Jan 2023Funding: BOF - postdoctoral mandates
- A whole new role for Unipept: a framework for comparative metaproteomics analysesFrom1 Oct 2019 → 31 Aug 2022Funding: FWO senior postdoctoral fellowship
- ELIXIR Infrastructure for Data and Services to strengthen Life-Sciences Research in FlandersFrom1 Jan 2019 → 31 Dec 2022Funding: FWO International research infrastructure (IRI)
- Microbial Resource Research InfrastructureFrom1 Nov 2012 → 30 Apr 2016Funding: Research infrastructures
- Advanced and distributed index structures for genome analysisFrom1 Oct 2010 → 5 Jan 2016Funding: IWT personal funding - specialisation scholarships
- Bioinformatics: from nucleotids to networks (N2N)From1 May 2010 → 30 Apr 2017Funding: BOF - Other initiatives
Publications
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- TESTed : an educational testing framework with language-agnostic test suites for programming exercises(2023)
Authors: Niko Strijbol, Charlotte Van Petegem, Rien Maertens, Boris Sels, Christophe Scholliers, Peter Dawyndt, Bart Mesuere
- Dodona : learn to code with a virtual co-teacher that supports active learning(2023)
Authors: Charlotte Van Petegem, Rien Maertens, Niko Strijbol, Jorg Van Renterghem, Felix Van der Jeugt, Bram De Wever, Peter Dawyndt, Bart Mesuere
- Unipept Desktop 2.0 : construction of targeted reference protein databases for metaproteogenomics analyses(2023)
Authors: Pieter Verschaffelt, Alessandro Tanca, Marcello Abbondio, Tim Van Den Bossche, Tibo Vande Moortele, Peter Dawyndt, Lennart Martens, Bart Mesuere
Pages: 2620 - 2628 - Unipept visualizations : an interactive visualization library for biological data(2022)
Authors: Pieter Verschaffelt, James Collier, Alexander Botzki, Lennart Martens, Peter Dawyndt, Bart Mesuere, Russell Schwartz
Pages: 562 - 563 - Dolos : language‐agnostic plagiarism detection in source code(2022)
Authors: Rien Maertens, Charlotte Van Petegem, Niko Strijbol, Toon Baeyens, Peter Dawyndt, Bart Mesuere
Pages: 1046 - 1061 - UMGAP : the Unipept MetaGenomics analysis pipeline(2022)
Authors: Felix Van der Jeugt, Rien Maertens, Aranka Steyaert, Pieter Verschaffelt, Caroline De Tender, Peter Dawyndt, Bart Mesuere
- Pass/fail prediction in programming courses(2022)
Authors: Charlotte Van Petegem, Louise Deconinck, Dieter Mourisse, Rien Maertens, Niko Strijbol, Bart Dhoedt, Bram De Wever, Peter Dawyndt, Bart Mesuere
Pages: 68 - 95 - Peat substrate amended with chitin modulates the N-cycle, siderophore and chitinase responses in the lettuce rhizobiome(2019)
Authors: Caroline De Tender, Bart Mesuere, Felix Van der Jeugt, A Haegeman, Tom Ruttink, B Vandecasteele, Peter Dawyndt, J Debode, EE Kuramae
- Introducing SPeDE : high-throughput dereplication and accurate determination of microbial diversity from matrix-assisted laser desorption-ionization time of flight mass spectrometry data(2019)
Authors: Charles Dumolin, Maarten Aerts, Bart Verheyde, Simon Schellaert, Felix Van der Jeugt, Evelien De Canck, Margo Cnockaert, Anneleen Wieme, Ilse Cleenwerck, Jindrich Peiren, et al.
- Temporal dynamics of bacterial and fungal colonization on plastic debris in the North Sea(2017)
Authors: Caroline De Tender, Lisa I Devriese, Annelies Haegeman, Sara Maes, Jürgen Vangeyte, André Cattrijsse, Peter Dawyndt, Tom Ruttink
Pages: 7350 - 7360
Linked dataset
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