Researcher
Lieven Clement
- Keywords:Statistical bioinformatics, Statistical genomics
- Disciplines:Applied mathematics in specific fields, Statistics and numerical methods, Computational transcriptomics and epigenomics, Development of bioinformatics software, tools and databases, Single-cell data analysis, Analysis of next-generation sequence data, Biostatistics
Affiliations
- Department of Applied Mathematics, Computer Science and Statistics (Department)
Member
From24 Sep 2012 → Today - Department of Mathematical Modelling, Statistics and Bio-informatics (Department)
Member
From2 Aug 2000 → 30 Sep 2010
Projects
1 - 10 of 15
- A new fragment-centric perspective on proteomicsFrom1 May 2022 → TodayFunding: FWO Medium Size Research Infrastructure
- Proteomics-derived epitopes for dramatically improved anticancer and antibacterial vaccine developmentFrom1 Jan 2021 → TodayFunding: BOF - projects
- Precision medicine in inherited blindness using integrated omics in human and animal modelsFrom1 Jan 2020 → TodayFunding: BOF - projects
- High-resolution differential expression analysis for single-cell RNA-seq dataFrom1 Nov 2019 → 15 Jul 2023Funding: FWO junior postdoctoral fellowship
- Methods for differential expression analysis in single-cell transcriptomics at the gene- and transcript-levelFrom1 Nov 2019 → 31 Oct 2023Funding: FWO Strategic Basic Research Grant
- Novel statistics tools for reliable proteome-wide quantification of post-translational modificationsFrom1 Nov 2019 → 31 Oct 2023Funding: FWO Strategic Basic Research Grant
- Novel statistics tools for reliable proteome-wide quantification of post-translational modifications.From1 Oct 2019 → 1 Nov 2019Funding: BOF - doctoral mandates
- A whole new role for Unipept: a framework for comparative metaproteomics analysesFrom1 Oct 2019 → 31 Aug 2022Funding: FWO senior postdoctoral fellowship
- Goodbye blackbox: elucidating the working mechanisms of biochar and chitin on plant growth and disease resistanceFrom1 Jan 2019 → 31 Dec 2019Funding: FWO research grant KAN
- Statistical inference for differential analysis in single cell transcriptomicsFrom1 Jan 2019 → 31 Dec 2022Funding: FWO research project (including WEAVE projects)
Publications
1 - 10 of 63
- Exploring the microbial response as a potential bio-indicator for soil health : insights from a controlled incubator experiment(2023)
Authors: Lisa Joos, Caroline De Tender, Astrid Holderbeke, Lieven Clement, Bart Vandecasteele, Jane Debode
- Quality control for the target decoy approach for peptide identification(2023)
Authors: Elke Debrie, Milan Malfait, Ralf Gabriels, Arthur Declercq, Adriaan Sticker, Lennart Martens, Lieven Clement
Pages: 350 - 358 - An interactive mass spectrometry atlas of histone posttranslational modifications in T-cell acute leukemia(2022)
Authors: Lien Provez, Bart Van Puyvelde, Laura Corveleyn, Nina Demeulemeester, Sigrid Verhelst, Beatrice Lintermans, Simon Daled, Juliette Roels, Lieven Clement, Lennart Martens, et al.
- satuRn: Scalable analysis of differential transcript usage for bulk and single-cell RNA-sequencing applications(2021)
Authors: Jeroen Gilis, Kristoffer Vitting-Seerup, Koen Van den Berge, Lieven Clement
- Altering the sex pheromone cyclo(L-Pro-L-Pro) of the diatom Seminavis robusta towards a chemical probe(2021)
Authors: Eli Bonneure, Amber De Baets, Sam De Decker, Koen Van den Berge, Lieven Clement, Wim Vyverman, Sven Mangelinckx
- Chitin in strawberry cultivation : foliar growth and defense response promotion, but reduced fruit yield and disease resistance by nutrient imbalances(2021)
Authors: Bart Vandecasteele, Sarah Ommeslag, Jill De Visscher, Lieven Clement, Jane Debode
Pages: 227 - 239 - Mating type specific transcriptomic response to sex inducing pheromone in the pennate diatom Seminavis robusta(2021)
Authors: Gust Bilcke, Koen Van den Berge, Sam De Decker, Nicole Poulsen, Petra Bulánková, Cristina Maria Osuna Cruz, Jack Dickenson, Koen Sabbe, Georg Pohnert, Klaas Vandepoele, et al.
Pages: 562 - 576 - Daring to be differential : metabarcoding analysis of soil and plant-related microbial communities using amplicon sequence variants and operational taxonomical units(2020)
Authors: Lisa Joos, Stien Beirinckx, Annelies Haegeman, Jane Debode, Bart Vandecasteele, Steve Baeyen, Sofie Goormachtig, Lieven Clement, Caroline De Tender
- Robust summarization and inference in proteome-wide label-free quantification(2020)
Authors: Adriaan Sticker, Ludger Goeminne, Lennart Martens, Lieven Clement
Pages: 1209 - 1219 - Trajectory-based differential expression analysis for single-cell sequencing data(2020)
Authors: Koen Van den Berge, Hector Roux de Bézieux, Kelly Street, Wouter Saelens, Robrecht Cannoodt, Yvan Saeys, Sandrine Dudoit, Lieven Clement