- Training of epitope-TCR prediction models with healthy donor-derived cancer-specific T cells(2024)
Authors: Donovan Flumens, Sofie Gielis, Esther Bartholomeus, Diana Campillo Davó, Maarten Versteven, Hans De Reu, Evelien Smits, Benson Ogunjimi, Kris Laukens, Pieter Meysman, et al.
Pages: 143 - 160
- Lack of functional TCR-epitope interaction is associated with herpes zoster through reduced downstream T cell activation(2024)
Authors: Marlies Boeren, Nicky de Vrij, Sebastiaan Valkiers, Aisha Souquette, Sofie Gielis, Mariia Kuznetsova, Jolien Schippers, Esther Bartholomeus, Johan Van den Bergh, Nele Michels, et al.
Pages: 1 - 18
- Analysis of Wilms’ tumor protein 1 specific TCR repertoire in AML patients uncovers higher diversity in patients in remission than in relapsed(2023)
Authors: Sofie Gielis, Donovan Flumens, Maarten Versteven, Hans De Reu, Esther Bartholomeus, Jolien Schippers, Diana Campillo Davó, Zwi Berneman, Sébastien Anguille, Evelien Smits, et al.
Number of pages: 24
- Clustering and annotation of T cell receptor repertoires(2023)
Authors: Sebastiaan Valkiers, Sofie Gielis, Vincent Van Deuren, Kris Laukens, Pieter Meysman
Pages: 33 - 51
- Recent advances in T-cell receptor repertoire analysis(2022)
Authors: Sebastiaan Valkiers, Nicky de Vrij, Sofie Gielis, Sara Verbandt, Benson Ogunjimi, Kris Laukens, Pieter Meysman
- Current challenges for unseen-epitope TCR interaction prediction and a new perspective derived from image classification(2021)
Authors: Pieter Moris, Joey De Pauw, Anna Postovskaya, Sofie Gielis, Nicolas De Neuter, Benson Ogunjimi, Kris Laukens, Pieter Meysman
- HLA-DRB1 alleles associated with lower leishmaniasis susceptibility share common amino acid polymorphisms and epitope binding repertoires(2021)
Authors: Nicky de Vrij, Pieter Meysman, Sofie Gielis, Wim Adriaensen, Kris Laukens, Bart Cuypers
- Identification of epitope-specific T cells in T-cell receptor repertoires(2020)
Authors: Sofie Gielis, Pieter Moris, Nicolas De Neuter, Benson Ogunjimi, Kris Laukens, Pieter Meysman
Pages: 183 - 195
- On the viability of unsupervised T-cell receptor sequence clustering for epitope preference(2019)
Authors: Pieter Meysman, Nicolas De Neuter, Sofie Gielis, Danh Bui-Thi, Benson Ogunjimi, Kris Laukens
Pages: 1461 - 1468
- Detection of enriched T cell epitope specificity in full T cell receptor sequence repertoires(2019)
Authors: Sofie Gielis, Pieter Moris, Nicolas De Neuter, Benson Ogunjimi, Kris Laukens, Pieter Meysman