Researcher
Stein Aerts
- Disciplines (Flanders Institute for Biotechnology):Adaptive agents and intelligent robotics
- Disciplines (KU Leuven):Other biological sciences
- See also: Stein Aerts (KU Leuven)
Affiliations
- Laboratory of Computational Biology (VIB-KU Leuven) (Division)
Responsible
From1 Oct 2009 → Today - VIB Center for AI & Computational Biology (Research Center)
Responsible
From1 Jul 2023 → Today - C20 Support (Research group)
Responsible
From1 Jul 2023 → 31 Dec 2023 - Dynamical Systems, Signal Processing and Data Analytics (STADIUS) (Division)
Member
From1 Aug 2020 → 30 Sep 2004 - Aerts Lab (Research group)
Responsible
From1 Jan 2017 → Today - Laboratory of Computational Biology (VIB-KU Leuven) (Division)
Member
From1 Oct 2009 → Today - Department of Human Genetics (Department)
Member
From1 Oct 2005 → 30 Nov 2017
Projects
1 - 5 of 5
- EMBO Postdoctoral fellowship for Lars BormFrom1 Jan 2024 → TodayFunding: EMBL
- Decoding animal genomes into cell typesFrom1 Jun 2023 → TodayFunding: HORIZON.1.1 - European Research Council (ERC)
- This grant is to support the work conducted by Stein Aerts on project learning regulatory codes from single-cell multi-ome atlases (D12) to predict, model, and compare gene regulatory networks and enhancer logic in brain and cancer cell types, by re-using human and mouse single-cell multi-ome atlases (Data Insights Cycle 2 RFA)From1 May 2023 → TodayFunding: Other international institutions, not mentioned elsewhere
- VIB Grant for Aerts Lab_Period:2022-01-01-2026-12-31From1 Jan 2022 → TodayFunding: FRI - Project driven research
- VIB Grant for Aerts Lab_Period:2017-01-01-2021-12-31From1 Jan 2017 → 31 Dec 2021Funding: FRI - Project driven research
Publications
1 - 10 of 51
- Cell type directed design of synthetic enhancers.(2024)
Authors: Ibrahim Ihsan Taskiran, Hannah Dickmaenken, Niklas Kempynck, Alexandra Pančíková, Eren Can Eksi, Joy Ismail, David Mauduit, Stein Aerts
Pages: e-pub - Systematic benchmarking of single-cell ATAC-sequencing protocols.(2024)
Authors: Florian De Rop, Christopher Flerin, Stein Aerts
Pages: e-pub - Single-cell spatial multi-omics and deep learning dissect enhancer-driven gene regulatory networks in liver zonation.(2024)
Authors: Maria Del Carmen Bravo Gonzalez Blas, Irina Matetovici, Hanne Hillen, Ibrahim Ihsan Taskiran, Jonas Demeulemeester, Nikoleta Psatha, David Mauduit, Georg Halder, Stein Aerts
Pages: e-pub - Shared enhancer gene regulatory networks between wound and oncogenic programs.(2023)
Authors: Swann Floc'hlay, Maria Del Carmen Bravo Gonzalez Blas, Seppe De Winter, Xiao-Jiang Quan, Georg Halder, Stein Aerts
Pages: e81173 - Emerging questions in transcriptional regulation.(2023)
Authors: Stein Aerts
Pages: 247-251 - Neuronal identity defines a-synuclein and tau toxicity.(2023)
Authors: Roman Praschberger, Natalie Kaempf, Jasper Janssens, Eliana Nachman, Stein Aerts, Patrik Verstreken
Pages: 1-14 - Mitochondria metabolism sets the species-specific tempo of neuronal development.(2023)
Authors: Ryohei Iwata, Pierre Casimir, Emir Erkol, Leila Boubakar, Isabel Maria Gallego Lopez, Anke Vandekeere, Nikky Corthout, Massimiliano Mazzone, Stein Aerts, Bart Ghesquière, et al.
Pages: eabn4705 - Reduced Levels of Misfolded and Aggregated Mutant p53 by Proteostatic Activation.(2023)
Authors: Jarne Pauwels, Rob van der Kant, Mark Fiers, Kris Gevaert, Stein Aerts, Frederic Rousseau, Joost Schymkowitz
Pages: 960 - SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks.(2023)
Authors: Maria Del Carmen Bravo Gonzalez Blas, Seppe De Winter, Nikolai Hecker, Irina Matetovici, Jasper Wouters, Sara Aibar Santos, Stein Aerts
Pages: 1355-1367 - Cell type diversity in a developing octopus brain.(2022)
Authors: Seppe De Winter, Stein Aerts
Pages: 7392