Organisation
Aerts Lab
Research Group
Current researchers
1 - 10 of 17 results
- Stein Aerts (Responsible)
- Darina Abaffyová (Member)
- Aibar Sara (Member)
- Cas Blaauw (Member)
- Lars Borm (Member)
- González-Blas Carmen (Member)
- Seppe De Winter (Member)
- Hannah Dickmaenken (Member)
- Sam Dieltiens (Member)
- Eren Can Eksi (Member)
Projects
1 - 8 of 8
- EMBO Postdoctoral fellowship for Lars BormFrom1 Jan 2024 → TodayFunding: EMBL
- Decoding animal genomes into cell typesFrom1 Jun 2023 → TodayFunding: HORIZON.1.1 - European Research Council (ERC)
- This grant is to support the work conducted by Stein Aerts on project learning regulatory codes from single-cell multi-ome atlases (D12) to predict, model, and compare gene regulatory networks and enhancer logic in brain and cancer cell types, by re-using human and mouse single-cell multi-ome atlases (Data Insights Cycle 2 RFA)From1 May 2023 → TodayFunding: Other international institutions, not mentioned elsewhere
- VIB Grant for Aerts Lab_Period:2022-01-01-2026-12-31From1 Jan 2022 → TodayFunding: FRI - Project driven research
- Understanding inherited and acquired genetic variation in Parkinson’s disease through single-cell multi-omics analyses: a unique data resourceFrom1 Mar 2021 → 29 Feb 2024Funding: Foreign foundations, funds with scientific view
- AI-driven enhancer design for gene therapyFrom1 Jan 2021 → 30 Jun 2022Funding: HORIZON.1.1 - European Research Council (ERC)
- Decoding and controlling cell-state switching: A bottom-up approach based on enhancer logicFrom1 Jun 2017 → 31 May 2022Funding: HORIZON.1.1 - European Research Council (ERC)
- VIB Grant for Aerts Lab_Period:2017-01-01-2021-12-31From1 Jan 2017 → 31 Dec 2021Funding: FRI - Project driven research
Publications
1 - 10 of 56
- Macrophage scavenger receptor 1 mediates lipid-induced inflammation in non-alcoholic fatty liver disease.(2022)
Authors: Jasper Wouters
Pages: 1001-1012 - Defining the molecular basis of oncogenic cooperation between TAL1 expression and Pten deletion in T-ALL using a novel pro-T-cell model system(2018)
Authors: Simon Bornschein, Sofie Demeyer, Rocco Stirparo, Bart Ghesquière, Stein Aerts, Jan Cools, Charles De Bock
Pages: 941-951 - SCENIC: single-cell regulatory network inference and clustering(2017)
Authors: Sara Aibar Santos, Maria Del Carmen Bravo Gonzalez Blas, Hana Imrichova, Florian Rambow, Jean-Christophe Marine, Zeynep Kalender, Jasper Wouters, Stein Aerts
Pages: 1083-1086 - cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data.(2019)
Authors: Maria Del Carmen Bravo Gonzalez Blas, Liesbeth Minnoye, Dafni Papasokrati, Sara Aibar Santos, Kristofer Davie, Jasper Wouters, Stein Aerts
Pages: 397-400 - Drosophila Voltage-Gated Sodium Channels Are Only Expressed in Active Neurons and Are Localized to Distal Axonal Initial Segment-like Domains.(2020)
Authors: Jasper Janssens, Stein Aerts
Pages: 7999-8024 - Toward Minimal Residual Disease-Directed Therapy in Melanoma(2018)
Authors: Florian Rambow, Aljosja Rogiers, Oskar Marin Bejar, Sara Aibar Santos, Michael Dewaele, Panagiotis Karras, Daniel Brown, Carmen Adriaens, Stein Aerts, Jean-Christophe Marine
Pages: 843-855 e19 - Hippo signaling instructs ectopic but not normal organ growth.(2022)
Authors: Weronika Kowalczyk, Hanne Hillen, Maria Del Carmen Bravo Gonzalez Blas, Soheil Soheily, Elisabeth Verboven, Iván Moya, Stein Aerts, Georg Halder
Pages: eabg3679 - SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks.(2023)
Authors: Maria Del Carmen Bravo Gonzalez Blas, Seppe De Winter, Nikolai Hecker, Irina Matetovici, Jasper Wouters, Sara Aibar Santos, Stein Aerts
Pages: 1355-1367 - A cellular hierarchy in melanoma uncouples growth and metastasis.(2022)
Authors: Panagiotis Karras, Joanna Pozniak, Ada Nowosad, Cecilia Pazzi, Nina Van Raemdonck, Ewout Landeloos, Dennis Pedri, Benjamin Pavie, Oskar Marin Bejar, Yichao Hua, et al.
Pages: 190-198 - Cell type directed design of synthetic enhancers.(2024)
Authors: Ibrahim Ihsan Taskiran, Hannah Dickmaenken, Niklas Kempynck, Alexandra Pančíková, Eren Can Eksi, Joy Ismail, David Mauduit, Stein Aerts
Pages: e-pub