Researcher
Tim De Meyer
- Keywords:epigenomics, aging, telomere biology, transcriptomics, allele-specific expression
- Disciplines:Structural bioinformatics and computational proteomics, Bioinformatics of disease, Computational transcriptomics and epigenomics, Vascular diseases, Biogerontology
Affiliations
- Department of Data analysis and mathematical modelling (Department)
Member
From1 Jan 2018 → Today - Department of Mathematical Modelling, Statistics and Bio-informatics (Department)
Member
From1 Feb 2011 → 31 Dec 2017 - Department of Molecular biotechnology (Department)
Member
From1 Oct 2004 → 30 Sep 2012
Projects
1 - 10 of 10
- The development of a cost-efficient eQTL scanning strategy to unravel the broad transcriptional response of a generalist pest to novel hostsFrom14 Apr 2024 → TodayFunding: BOF - doctoral mandates
- A bioinformatic toolbox for the analysis and optimization of a high-throughput deep mutational scanning assay: development and case-studyFrom1 Nov 2020 → TodayFunding: FWO fellowships
- GRAY – Ghent University Research for “Aging Young”.From1 Jan 2020 → TodayFunding: BOF - research organisations
- The development of a cost-efficient eQTL scanning strategy to unravel the broad transcriptional response of a generalist pest to novel hosts.From1 Jan 2020 → 31 Dec 2023Funding: FWO research project (including WEAVE projects)
- In-depth study of structure/activity relations of the glucocorticoid receptor and its ligands via an extreme mutation scan.From1 Nov 2019 → 31 Oct 2023Funding: FWO Strategic Basic Research Grant
- MAGE – Modelling of Allelic Gene Expression in health and disease.From1 Oct 2019 → TodayFunding: BOF - projects
- Bioinformatics for a high-throughput deep mutational scanning protein-protein interaction assay: turning a prototype into a precision medicine toolboxFrom1 Oct 2019 → 31 Oct 2020Funding: BOF - doctoral mandates
- Epigenetic control of rice immunity hub genesFrom1 Jan 2017 → 31 Dec 2020Funding: FWO research project (including WEAVE projects)
- Epigenomics: short term adaptation with long term consequencesFrom1 Feb 2011 → 31 Jan 2021Funding: BOF - ZAP BOF mandates
- Bioinformatics: from nucleotids to networks (N2N)From1 May 2010 → 30 Apr 2017Funding: BOF - Other initiatives
Publications
1 - 10 of 43
- Liver transcriptomic and methylomic analyses identify transcriptional mitogen-activated protein kinase regulation in facultative hibernation of Syrian hamster(2023)
Authors: Louis Coussement, Marloes M. Oosterhof, Victor Guryev, Vera A. Reitsema, Jojanneke J. Bruintjes, Maaike Goris, Hjalmar R. Bouma, Tim De Meyer, Marianne G. Rots, Robert H. Henning
- Promoter hypermethylation of neural-related genes is compatible with stemness in solid cancers(2023)
Authors: Musa Idris, Louis Coussement, Maria M. M. Alves, Tim De Meyer, Veerle Melotte
- Diproline-induced resistance to parasitic nematodes in the same and subsequent rice generations : roles of iron, nitric oxide and ethylene(2023)
Authors: Jonas De Kesel, Eli Bonneure, Michael Frei, Tim De Meyer, Sven Mangelinckx, Tina Kyndt
- Dicer-like 3a mediates intergenerational resistance against root-knot nematodes in rice via hormone responses(2023)
Authors: Aniko Meijer, Mohammad Reza Atighi Quchan Atigh, Kristof Demeestere, Tim De Meyer, Klaas Vandepoele, Tina Kyndt
Pages: 2071 - 2085 - Dehydroascorbate induces plant resistance in rice against root‐knot nematode Meloidogyne graminicola(2022)
Authors: Satish Chavan, Jonas De Kesel, Willem Desmedt, Eva Degroote, Richard Raj Singh, Giang Thanh Nguyen Thi, Kristof Demeestere, Tim De Meyer, Tina Kyndt
Pages: 1303 - 1319 - Transcript- and annotation-guided genome assembly of the European starling(2022)
Authors: Katarina C. Stuart, Richard J. Edwards, Yuanyuan Cheng, Wesley C. Warren, David W. Burt, William B. Sherwin, Natalie R. Hofmeister, Scott J. Werner, Gregory F. Ball, Melissa Bateson, et al.
Pages: 3141 - 3160 - Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues(2022)
Authors: Aniko Meijer, Tim De Meyer, Klaas Vandepoele, Tina Kyndt
- A hypomorphic mutant of PHD domain protein male meiocytes death 1(2021)
Authors: Bing Liu, Chunlian Jin, Nico De Storme, Sébastien Schotte, Cédric Schindfessel, Tim De Meyer, Danny Geelen
- Identification of DNA methylation markers for early detection of CRC indicates a role for nervous system-related genes in CRC(2021)
Authors: Glenn Rademakers, Maartje Massen, Alexander Koch, Muriel X. Draht, Nikkie Buekers, Kim A. D. Wouters, Nathalie Vaes, Tim De Meyer, Beatriz Carvalho, Gerrit A. Meijer, et al.
- Genome-wide shifts in histone modifications at early stage of rice infection with Meloidogyne graminicola(2021)
Authors: Mohammad Atighi Quchan Atigh, Bruno Verstraeten, Tim De Meyer, Tina Kyndt
Pages: 440 - 455