Publicaties
Understanding sexual transmission dynamics and transmission contexts of monkeypox virus : a mixed-methods study of the early outbreak in Belgium (May-June 2022) Universiteit Gent Instituut voor Tropische Geneeskunde
Exploring HIV-1 transmission dynamics by combining phylogenetic analysis and infection timing Instituut voor Tropische Geneeskunde Universiteit Gent KU Leuven Vrije Universiteit Brussel
HIV-1 pol sequences obtained through baseline drug resistance testing of patients newly diagnosed between 2013 and 2017 were analyzed for genetic similarity. For 927 patients the information on genetic similarity was combined with demographic data and with information on the recency of infection. Overall, 48.3% of the patients were genetically linked with 11.4% belonging to a pair and 36.9% involved in a cluster of >= 3 members. The ...
Complexities in using sentinel pigs to study Taenia solium transmission dynamics under field conditions Instituut voor Tropische Geneeskunde
The way of water : unravelling White Spot Syndrome Virus (WSSV) transmission dynamics in Litopenaeus vannamei shrimp Universiteit Gent
Population structure and spatio-temporal transmission dynamics of Plasmodium vivax after radical cure treatment in a rural village of the Peruvian Amazon Instituut voor Tropische Geneeskunde Universiteit Antwerpen Universiteit Gent
Complexities in using sentinel pigs to study Taenia solium transmission dynamics under field conditions Universiteit Gent
Transmission dynamics of methicillin-resistant Staphylococcus aureus in pigs Universiteit Gent
Evolutionary dynamics and complicated genetic transmission network patterns of HIV-1 CRF01_AE among MSM in Shanghai, China Instituut voor Tropische Geneeskunde
To explore the evolutionary dynamics and molecular transmission patterns of HIV-1 CRF01_AE in depth among men who have sex with men (MSM) in Shanghai, we constructed phylogenetic tree and genetic transmission networks based on 1, 152 pol sequences from MSM, 282 from other risk groups and 795 references. Phylogenetic analyses identified two distinct major CRF01_AE lineages and a Shanghai-based sub-lineage. The estimated tMRCAs for lineage 1 ...