Researcher
Pieter-Jan Volders
- Disciplines (Flanders Institute for Biotechnology):Analytical biochemistry, Cell death and senescence, Analysis of next-generation sequence data, General diagnostics
- Disciplines (Ghent University):Structural bioinformatics and computational proteomics, Development of bioinformatics software, tools and databases, Computational transcriptomics and epigenomics
Affiliations
- Department of Biomolecular Medicine (Department)
Member
From1 Oct 2018 → Today - Martens Lab (Research group)
Member
From1 Jan 2017 → 11 Feb 2022 - Department of Biochemistry (Department)
Member
From1 Oct 2015 → 30 Sep 2018 - Department of Pediatrics and medical genetics (Department)
Member
From1 Oct 2011 → 25 Sep 2016
Projects
1 - 2 of 2
- Development of a laboratory toolbox to study human circular RNAsFrom1 Oct 2021 → TodayFunding: BOF - projects
- The first genome-wide maps of the micropeptidome validated through large-scale reprocessing of public proteomics dataFrom1 Oct 2020 → 13 Feb 2022Funding: FWO senior postdoctoral fellowship
Publications
1 - 10 of 21
- Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision(2023)
Authors: Marieke Vromman, Jasper Anckaert, Stefania Bortoluzzi, Alessia Buratin, Chia-Ying Chen, Qinjie Chu, Trees-Juen Chuang, Roozbeh Dehghannasiri, Christoph Dieterich, Xin Dong, et al.
Pages: 1159 - 1169 - Orthogonal proteomics methods to unravel the HOTAIR interactome(2022)
Authors: Louis Delhaye, Edith De Bruycker, Pieter-Jan Volders, Daria Fijalkowska, Delphine De Sutter, Sven Degroeve, Lennart Martens, Pieter Mestdagh, Sven Eyckerman
- Sensitive and specific spectral library searching with CompOmics Spectral library Searching tool and Percolator(2022)
Authors: Genet Abay Shiferaw, Ralf Gabriels, Robbin Bouwmeester, Tim Van Den Bossche, Elien Vandermarliere, Lennart Martens, Pieter-Jan Volders
Pages: 1365 - 1370 - Validation of circular RNAs using RT‐qPCR after effective removal of linear RNAs by ribonuclease R(2021)
Authors: Marieke Vromman, Nurten Yigit, Kimberly Verniers, Steve Lefever, Jo Vandesompele, Pieter-Jan Volders
- MEIS2 is an adrenergic core regulatory transcription factor involved in early initiation of TH-MYCN-driven neuroblastoma formation(2021)
Authors: Jolien De Wyn, Mark W. Zimmerman, Nina Weichert-Leahey, Carolina de Carvalho Nunes, Belamy B. Cheung, Brian J. Abraham, Anneleen Beckers, Pieter-Jan Volders, Bieke Decaesteker, Daniel R. Carter, et al.
- The RNA Atlas expands the catalog of human non-coding RNAs(2021)
Authors: Lucia Lorenzi, Hua-Sheng Chiu, Francisco Avila Cobos, Stephen Gross, Pieter-Jan Volders, Robrecht Cannoodt, Justine Nuytens, Katrien Vanderheyden, Jasper Anckaert, Steve Lefever, et al.
Pages: 1453 - 1465 - SPECS: a non-parametric method to identify tissue-specific molecular features for unbalanced sample groups(2020)
Authors: Celine Everaert, Pieter-Jan Volders, Annelien Morlion, Olivier Thas, Pieter Mestdagh
- Distinct Notch1 and BCL11B requirements mediate human γδ/αβ T cell development(2020)
Authors: Anne-Catherine Dolens, Kaat Durinck, Marieke Lavaert, Joni Van der Meulen, Imke Velghe, Jelle De Medts, Karin Weening, Juliette Roels, Katrien De Mulder, Pieter-Jan Volders, et al.
- RNAcentral : a hub of information for non-coding RNA sequences(2019)
Authors: Blake A Sweeney, Anton I Petrov, Boris Burkov, Robert D Finn, Alex Bateman, Maciej Szymanski, Wojciech M Karlowski, Jan Gorodkin, Stefan E Seemann, Jamie J Cannone, et al.
Pages: D221 - D229 - Expanding the use of spectral libraries in proteomics(2018)
Authors: Eric W Deutsch, Yasset Perez-Riverol, Robert J Chalkley, Mathias Wilhelm, Stephen Tate, Timo Sachsenberg, Mathias Walzer, Lukas Käll, Bernard Delanghe, Sebastian Böcker, et al.
Pages: 4051 - 4060