Researcher
Filip Van Nieuwerburgh
- Keywords:Massively parallel sequencing, Applied bioinformatics
- Disciplines:Pharmogenetics and -genomics, Genetics, Epigenetics, Immunogenetics
Affiliations
- Department of Pharmaceutics (Department)
Member
From1 Sep 1999 → Today
Infrastructure
1 - 1 of 1
- PromethION: nanopore sequencer for DNA and RNA sequencing (Consortium coordinator)
Projects
1 - 10 of 26
- Unraveling the role of the immune system in the development of exuberant granulation tissue in horse woundsFrom1 Jan 2024 → TodayFunding: BOF - doctoral mandates
- Extracellular vesicles from follicular fluid are key for successful development of fresh and vitrified equine oocytesFrom16 Oct 2023 → TodayFunding: BOF - postdoctoral mandates
- qPCR system for NGS library quality control, gene expression measurement, hybridization curve, and melting curve analysisFrom15 Dec 2022 → TodayFunding: BOF - scientific equipment program
- Cofunding core facility - Ghent Light Microscopy (GLiM)From1 Jul 2022 → TodayFunding: BOF - research organisations
- Cofunding core facility - UGent NGS CoreFrom1 Jul 2022 → TodayFunding: BOF - research organisations
- Modular high-end mass spectrometer for ultrasensitive quantification and imaging of small organic molecules in cross-health research - MSsmall-XHFrom1 May 2022 → TodayFunding: FWO Medium Size Research Infrastructure
- Empirical exploration of novel DNA probes for hybridization to tandem repeatsFrom1 Nov 2021 → TodayFunding: FWO Strategic Basic Research Grant
- Nanopore sequencing of complete pharmacogenes after CRISPR/Cas9 enrichment in tamoxifen and clopidogrel patients allowing enhanced haplotyping and continuous scale machine learning efficacy prediction.From1 Oct 2021 → TodayFunding: BOF - doctoral mandates
- PEA histone modification proteomicsFrom1 Mar 2021 → 31 Dec 2023Funding: IOF - technology validation in lab
- Stimulated emission depletion microscopy (STED): Nanoscopy for innovative research in the life sciencesFrom1 May 2020 → TodayFunding: FWO Medium Size Research Infrastructure
Publications
31 - 40 of 274
- Veterinarians’ competence in applying basic genetic principles and daily implementation of clinical genetics : a study in a university environment(2022)
Authors: Evelien Bogaerts, Else den Boer, Luc Peelman, Filip Van Nieuwerburgh, Hille Fieten, Jimmy Saunders, Bart Broeckx
Pages: 799 - 806 - Signatures of polygenic adaptation align with genome-wide methylation patterns in wild strawberry plants(2022)
Authors: Hanne De Kort, Tuomas Toivainen, Filip Van Nieuwerburgh, Javier Andres, Timo P. Hytonen, Olivier Honnay
Pages: 1501 - 1514 - Nanopore sequencing of a forensic combined STR and SNP multiplex(2022)
Authors: Olivier Tytgat, Sonja Skevin, Dieter Deforce, Filip Van Nieuwerburgh
- PIWI proteins play an antiviral role in Lepidopteran cell lines(2022)
Authors: Dulce Santos, Thomas-Wolf Verdonckt, Lina Mingels, Stijn Van den Brande, Bart Geens, Filip Van Nieuwerburgh, Anna Kolliopoulou, Luc Swevers, Niels Wynant, Jozef Vanden Broeck
- Metallothioneins alter macrophage phenotype and represent novel therapeutic targets for acetaminophen-induced liver injury(2022)
Authors: Sanne Van Campenhout, Sander Lefere, Sarah Raevens, Laurentijn Tilleman, Filip Van Nieuwerburgh, Hannelore P. Van Eeckhoutte, Anne Hoorens, Michael A. Lynes, Anja Geerts, Debby Laukens
Pages: 123 - 133 - Lycopene supplementation to serum-free maturation medium improves in vitro bovine embryo development and quality and modulates embryonic transcriptomic profile(2022)
Authors: Shehu Sidi, Osvaldo Américo Bogado Pascottini, Daniel Angel Velez, Nima Azaridolatabad, Krishna Pavani, . Gretania Residiwati, Tim Meese, Filip Van Nieuwerburgh, Elias Kambai Bawa, Ambrose Alikidon Voh, et al.
- RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition(2022)
Authors: Carolina de Carvalho Nunes, Lisa Depestel, Liselot Mus, Kaylee M. Keller, Louis Delhaye, Amber Louwagie, Muhammad Rishfi, Alex Whale, Neesha Kara, Simon R. Andrews, et al.
- Metabolism and health effects of rare sugars in a CACO-2/HepG2 coculture model(2022)
Authors: Amar Daniël Emanuel Van Laar, Charlotte Grootaert, Filip Van Nieuwerburgh, Dieter Deforce, Tom Desmet, Koen Beerens, John Van Camp
- A tapt1 knockout zebrafish line with aberrant lens development and impaired vision models human pediatric cataract(2022)
Authors: Tamara Jarayseh, Brecht Guillemyn, Hanna De Saffel, Jan Willem Bek, Sujatha Jagadeesh, Sofie Symoens, Fransiska Malfait, Delfien Syx, Filip Van Nieuwerburgh, Yannick Gansemans, et al.
Number of pages: 1 - Multigenerational DNA methylation responses to copper exposure in daphnia : potential targets for epigenetic biomarkers?(2022)
Authors: Guilherme Jeremias, Telma Veloso, Fernando J.M. Gonçalves, Filip Van Nieuwerburgh, Joana Luísa Pereira, Jana Asselman
Patents
1 - 2 of 2
- Hydrolysis-based probe and method for STR genotyping (Inventor)
- Probe and method for STR-genotyping (Inventor)