Onderzoeker
Koen Van den Berge
- Disciplines:Biostatistiek, Ontwikkeling van bio-informatica software, tools en databases, Single-cell data analyse, Analyse van next-generation sequence data
Affiliaties
- Vakgroep Toegepaste Wiskunde, Informatica en Statistiek (Departement)
Lid
Vanaf8 okt 2014 → 15 jul 2023
Projecten
1 - 2 of 2
- Verhoogde resolutie voor differentiële expressie analyse in single-cell RNA-seq dataVanaf1 nov 2019 → 15 jul 2023Financiering: FWO junior postdoctoraal mandaat
- Wavelet gebaseerde functionele modellen voor de analyse van next generation sequencing dataVanaf1 jan 2016 → 31 okt 2019Financiering: FWO Strategische Onderzoeksbeurs
Publicaties
11 - 19 van 19
- Distinctive growth and transcriptional changes of the diatom Seminavis robusta in response to quorum sensing related compounds(2020)
Auteurs: Frederike Stock genannt Schroer, Gust Bilcke, Sam De Decker, Cristina Maria Osuna Cruz, Koen Van den Berge, Emmelien Vancaester, Lieven De Veylder, Klaas Vandepoele, Wim Vyverman
- RNA sequencing data : hitchhiker's guide to expression analysis(2019)
Auteurs: Koen Van den Berge, Katharina M Hembach, Charlotte Soneson, Simone Tiberi, Lieven Clement, Michael I Love, Rob Patro, Mark D Robinson
Pagina's: 139 - 173 - Statistical methods for differential expression analysis in bulk and single-cell RNA-sequencing applications(2019)
Auteurs: Koen Van den Berge
- Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications(2018)
Auteurs: Koen Van den Berge, Fanny Perraudeau, Charlotte Soneson, Michael I Love, Davide Risso, Jean-Philippe Vert, Mark D Robinson, Sandrine Dudoit, Lieven Clement
- Effect of management and age of ploughed out grass-clover on forage maize yield and residual soil nitrogen(2018)
Auteurs: Koen Van den Berge, Tommy D'Hose, Lieven Clement
Pagina's: 748 - 757 - Neurogenomic profiling reveals distinct gene expression profiles between brain parts that are consistent in ophthalmotilapia cichlids(2018)
Auteurs: Sofie Derycke, Loic Kéver, Koen Herten, Koen Van den Berge, Maarten Van Steenberge, Jeroen Van Houdt, Lieven Clement, Pascal Poncin, Eric Parmentier, Erik Verheyen
- stageR : a general stage-wise method for controlling the gene-level false discovery rate in differential expression and differential transcript usage(2017)
Auteurs: Koen Van den Berge, Charlotte Soneson, Mark D Robinson, Lieven Clement
- A sex-inducing pheromone triggers cell cycle arrest and mate attraction in the diatom Seminavis robusta(2016)
Auteurs: Sara Moeys, Johannes Frenkel, Christine Lembke, Jeroen Gillard, Valerie Devos, Koen Van den Berge, Barbara Bouillon, Marie Huysman, Sam De Decker, Julia Scharf, et al.
- Quantifying expression divergence of duplicated genes with microarrays(2015)
Auteurs: Koen Van den Berge, Riet De Smet, Yves Van de Peer, Lieven Clement
Aantal pagina's: 1